Dr Justin Pachebat PhD, MSc, BSc
Senior Lecturer in Microbial Genomics
- Senior Lecturer in Microbial GenomicsDepartment of Biological, Environmental and Rural Sciences - Teaching And Research
Department of Biological, Environmental and Rural Sciences
Postal address
Aberystwyth University
Edward Llwyd Building
Penglais
Aberystwyth
Edward Llwyd Building
Penglais
Aberystwyth
United Kingdom of Great Britain and Northern Ireland
ORCID: 0000-0003-3369-3205
- 2021
Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches
Huws, S. A., Edwards, J. E., Lin, W., Rubino, F., Alston, M., Swarbreck, D., Caim, S., Rees Stevens, P., Pachebat, J., Won, M. Y., Oyama, L. B., Creevey, C. J. & Kingston-Smith, A., 21 Jun 2021, In: Microbiome. 9, 1, 17 p., 143.Research output: Contribution to journal › Article › peer-review
- 2020
The Isolation and Genome Sequencing of Five Novel Bacteriophages From the Rumen Active Against Butyrivibrio fibrisolvens
Friedersdorff, J. C. A., Kingston-Smith, A., Pachebat, J., Cookson, A., Rooke, D. & Creevey, C. J., 14 Jul 2020, In: Frontiers in Microbiology. 11, 13 p., 1588.Research output: Contribution to journal › Article › peer-review
- 2019
Domestication of Campylobacter jejuni NCTC 11168
Pascoe, B., Williams, L. K., Calland, J. K., Meric, G., Hitchings, M. D., Dyer, M., Ryder, J., Shaw, S., Lopes, B. S., Chintoan-Uta, C., Allan, E., Vidal, A., Fearnley, C., Everest, P., Pachebat, J., Cogan, T. A., Stevens, M. P., Humphrey, T. J., Wilkinson, T. S., Cody, A. J. & 12 others, Colles, F. M., Jolley, K. A., Maiden, M. C. J., Strachan, N., Pearson, B. M., Linton, D., Wren, B. W., Parkhill, J., Kelly, D. J., van Vliet, A. H. M., Forbes, K. J. & Sheppard, S. K., 16 Jul 2019, (E-pub ahead of print) In: Microbial Genomics.Research output: Contribution to journal › Article › peer-review
The evolutionary genomics of anthroponosis in Cryptosporidium
Nader, J., Mathers, T., Ward, B., Pachebat, J., Swain, M., Robinson, G., Chalmers, R. M., Hunter, P. R., van Oosterhout, C. & Tyler, K., 04 Mar 2019, In: Nature Microbiology. 4, N/A, p. 826-836 11 p.Research output: Contribution to journal › Article › peer-review
Genomic analysis of bacteria in the Acute Oak Decline pathobiome
Doonan, J., Denman, S., Pachebat, J. & McDonald, J., 08 Jan 2019, In: Microbial Genomics. 5, 1, 0240.Research output: Contribution to journal › Article › peer-review
- Published
Identifying and Resolving Genome Misassembly Issues Important for Biomarker Discovery in the Protozoan Parasite, Cryptosporidium
Morris, A., Pachebat, J., Robinson, G., Chalmers, R. M. & Swain, M., 2019, Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies : Volume 3: BIOINFORMATICS. Prague: SciTePress, Vol. 3. p. 90-100 11 p. (Biomedical Engineering Systems and Technologies).Research output: Chapter in Book/Report/Conference proceeding › Conference Proceeding (Non-Journal item)
- 2017
A pilot study using metagenomic sequencing of the sputum microbiome suggests potential bacterial biomarkers for lung cancer
Cameron, S., Lewis, K. E., Huws, S., Hegarty, M., Lewis, P. D., Pachebat, J. & Mur, L., 25 May 2017, In: PLoS One. 12, 5, 17 p., e0177062.Research output: Contribution to journal › Article › peer-review
- 2016
Terminator Operon Reporter: Combining a transcription termination switch with reporter technology for improved gene synthesis and synthetic biology applications
Zampini, M., Mur, L., Rees Stevens, P., Pachebat, J., Newbold, C., Hayes, F. & Kingston-Smith, A., 25 May 2016, In: Scientific Reports. 6, 26572.Research output: Contribution to journal › Article › peer-review
DOI: 10.1038/srep26572Seasonal immunoregulation in a naturally-occurring vertebrate
Brown, M., Hablutzel, P., Friberg, I. M., Thomason, A. G., Stewart, A., Pachebat, J. & Jackson, J., 18 May 2016, In: BMC Genomics. 17, N/A, 18 p., 369.Research output: Contribution to journal › Article › peer-review
Metagenomic Sequencing of the Chronic Obstructive Pulmonary Disease Upper Bronchial Tract Microbiome Reveals Functional Changes Associated with Disease Severity
Cameron, S., E. Lewis, K., Huws, S., Lin, W., Hegarty, M., D. Lewis, P., Mur, L. & Pachebat, J., 12 Feb 2016, In: PLoS One. 11, 2, 16 p., e0149095.Research output: Contribution to journal › Article › peer-review